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1.
Entropy (Basel) ; 26(4)2024 Apr 05.
Artigo em Inglês | MEDLINE | ID: mdl-38667873

RESUMO

In the acquisition process of 3D cultural relics, it is common to encounter noise. To facilitate the generation of high-quality 3D models, we propose an approach based on graph signal processing that combines color and geometric features to denoise the point cloud. We divide the 3D point cloud into patches based on self-similarity theory and create an appropriate underlying graph with a Markov property. The features of the vertices in the graph are represented using 3D coordinates, normal vectors, and color. We formulate the point cloud denoising problem as a maximum a posteriori (MAP) estimation problem and use a graph Laplacian regularization (GLR) prior to identifying the most probable noise-free point cloud. In the denoising process, we moderately simplify the 3D point to reduce the running time of the denoising algorithm. The experimental results demonstrate that our proposed approach outperforms five competing methods in both subjective and objective assessments. It requires fewer iterations and exhibits strong robustness, effectively removing noise from the surface of cultural relic point clouds while preserving fine-scale 3D features such as texture and ornamentation. This results in more realistic 3D representations of cultural relics.

2.
Front Immunol ; 14: 1297354, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-38259471

RESUMO

We investigated the effect of global Plexin B1 deficiency on allergic airway responses to house dust mite (HDM) or ovalbumin (OVA). In the HDM model, there were higher Th2 cytokine levels in the BALF of Plexin B1 knock-out (KO) mice compared to wild type (WT), and tissue inflammation and mucus production were modestly enhanced. In the OVA model, Plexin B1 deficiency led to increases in lung inflammation, mucus production, and lung Th2 cytokines accompanied by dysregulated mucin gene expression without affecting anti-OVA IgE/IgG1 levels. Spleen cells from Plexin B1 KO mice proliferated more robustly than WT cells in vitro to a variety of stimuli. Plexin B1 KO CD4+ T cells from spleens expressed higher levels of Ki-67 and CD69 compared to WT cells. Spleen cells from naïve Plexin B1 KO mice secreted increased amounts of IL-4 and IL-6 when pulsed in vitro with OVA whereas in vivo OVA-primed spleen cells produced IL-4/IL-5 when subjected to in vitro OVA restimulation. The upregulated allergic inflammatory response in Plexin B1 KO mice was associated with a lower number of Tregs in the lung tissues. Moreover, these mice displayed lower numbers of Treg cells in the lymphoid tissues at the baseline. These results demonstrate a previously unrecognized link between Plexin B1, Treg cells, and mucus in allergic lung inflammation.


Assuntos
Hipersensibilidade , Proteínas do Tecido Nervoso , Receptores de Superfície Celular , Linfócitos T Reguladores , Animais , Camundongos , Citocinas , Dermatophagoides pteronyssinus , Inflamação , Interleucina-4 , Mucinas , Proteínas do Tecido Nervoso/metabolismo , Ovalbumina , Pneumonia , Receptores de Superfície Celular/metabolismo
3.
Sci Total Environ ; 821: 153449, 2022 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-35093345

RESUMO

Forests play an essential role in mitigating climate change by sequestering carbon dioxide from the atmosphere. The establishment of mixed plantations is a promising way to store carbon (C) in soil compared with monocultures. However, monoculture forests largely dominate the rapid increase in forest areas in China. To optimize afforestation strategies and maximize the subsequent potential of C sequestration, we conducted a meta-analysis with 427 observations across 176 study sites in China. The goal was to quantify changes in the stocks of soil organic carbon (SOC) in mixed plantations compared with monocultures and to identify the predominant drivers for the stocks of SOC, including geological location, climatic factors, land use history, edaphic properties, plantation age, the inclusion of nitrogen-fixing trees, mixing proportion, and mixed plant types. The results showed that mixed plantations significantly increased the SOC stocks by 12% compared with monocultures, and the mixing proportion should not exceed 55% to produce higher SOC stocks in mixed plantations compared with monoculture. Additionally, mixed plantations in barren land are the most likely to increase the SOC stocks with limited water or low temperatures for growth. Additional measures instead of mixed plantations should be explored to increase SOC stocks in north, central, and northwest China. The data from this study demonstrated the spatiotemporal variability on the storage of SOC driven by mixed trees and has valuable implications for the establishment and management of afforestation.


Assuntos
Sequestro de Carbono , Carbono , Florestas , Solo , Biodiversidade , Carbono/análise , China , Ecossistema , Recuperação e Remediação Ambiental , Compostos Orgânicos/análise , Solo/química
4.
Sci Rep ; 11(1): 22573, 2021 Nov 19.
Artigo em Inglês | MEDLINE | ID: mdl-34799593

RESUMO

Geometry images parameterise a mesh with a square domain and store the information in a single chart. A one-to-one correspondence between the 2D plane and the 3D model is convenient for processing 3D models. However, the parameterised vertices are not all located at the intersection of the gridlines the existing geometry images. Thus, errors are unavoidable when a 3D mesh is reconstructed from the chart. In this paper, we propose parameterise surface onto a novel geometry image that preserves the constraint of topological neighbourhood information at integer coordinate points on a 2D grid and ensures that the shape of the reconstructed 3D mesh does not change from supplemented image data. We find a collection of edges that opens the mesh into simply connected surface with a single boundary. The point distribution with approximate blue noise spectral characteristics is computed by capacity-constrained delaunay triangulation without retriangulation. We move the vertices to the constrained mesh intersection, adjust the degenerate triangles on a regular grid, and fill the blank part by performing a local affine transformation between each triangle in the mesh and image. Unlike other geometry images, the proposed method results in no error in the reconstructed surface model when floating-point data are stored in the image. High reconstruction accuracy is achieved when the xyz positions are in a 16-bit data format in each image channel because only rounding errors exist in the topology-preserving geometry images, there are no sampling errors. This method performs one-to-one mapping between the 3D surface mesh and the points in the 2D image, while foldovers do not appear in the 2D triangular mesh, maintaining the topological structure. This also shows the potential of using a 2D image processing algorithm to process 3D models.

5.
Front Plant Sci ; 12: 723595, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34712251

RESUMO

Soil phosphate (Pi) deficiency is a global issue and a major constraint on plant growth. Plants typically acclimatize to low Pi by enhancing their P utilization and/or P acquisition efficiencies; however, different species have variable preferred strategies. RNA sequencing analysis was performed on the shoots and roots of Zygophyllum xanthoxylum, under 1 day and 10 days of Pi stress, to investigate their adaptation strategies to P deprivation. A total of 364,614 unigenes and 9,270 differentially expressed genes (DEGs) were obtained via transcriptome sequencing. An analysis of the DEGs revealed that under the 10D treatment, anthocyanin synthesis genes were upregulated under Pi stress, whereas gibberellin, ethylene, and cytokinins synthesis genes were upregulated, and abscisic acid synthesis genes were downregulated. Genes related to organic acid synthesis, encoding for purple acid phosphatases (APase) and nucleases (RNase) were upregulated under the 1D and 10D treatments, respectively. Furthermore, genes associated with Pi transport were induced by Pi stress. Zygophyllum xanthoxylum has special P adaptation strategies, the variation trends of genes involved in external P mobilization and acquisition, which were different from that of most other species; however, the expression levels of organophosphorus mobilization related genes, such as APases and RNases, were significantly increased. Meanwhile, PHT2s and TPTs, which distributed Pi to effective sites (e.g., chloroplast), played critical roles in the maintenance of photosynthesis. We speculated that these were economic and energy saving strategies, and there are critical adaptive mechanisms that Z. xanthoxylum employs to cope with deficits in Pi.

6.
Mol Plant Pathol ; 22(1): 48-63, 2021 01.
Artigo em Inglês | MEDLINE | ID: mdl-33118686

RESUMO

Nonspecific lipidtransfer proteins (nsLTPs), which are small, cysteine-rich proteins, belong to the pathogenesis-related protein family, and several of them act as positive regulators during plant disease resistance. However, the underlying molecular mechanisms of these proteins in plant immune responses are unclear. In this study, a typical nsLTP gene, StLTP10, was identified and functionally analysed in potato. StLTP10 expression was significantly induced by Phytophthora infestans, which causes late blight in potato, and defence-related phytohormones, including abscisic acid (ABA), salicylic acid, and jasmonic acid. Characterization of StLTP10-overexpressing and knockdown lines indicated that StLTP10 positively regulates plant resistance to P. infestans. This resistance was coupled with enhanced expression of reactive oxygen species scavenging- and defence-related genes. Furthermore, we identified that StLTP10 physically interacts with ABA receptor PYL4 and affects its subcellular localization. These two proteins work together to regulate stomatal closure during pathogen infection. Interestingly, we also found that wound-induced protein kinase interacts with StLTP10 and positively regulates its protein abundance. Taken together, our results provide insight into the role of StLTP10 in resistance to P. infestans and suggest candidates to enhance broad-spectrum resistance to pathogens in potato.


Assuntos
Proteínas de Transporte/metabolismo , Resistência à Doença/genética , Phytophthora infestans/fisiologia , Doenças das Plantas/imunologia , Solanum tuberosum/genética , Ácido Abscísico/metabolismo , Proteínas de Transporte/genética , Doenças das Plantas/parasitologia , Reguladores de Crescimento de Plantas/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Estômatos de Plantas/genética , Estômatos de Plantas/imunologia , Estômatos de Plantas/parasitologia , Ácido Salicílico/metabolismo , Solanum tuberosum/imunologia , Solanum tuberosum/parasitologia
7.
Entropy (Basel) ; 22(11)2020 Nov 13.
Artigo em Inglês | MEDLINE | ID: mdl-33287058

RESUMO

Computer-aided classification serves as the basis of virtual cultural relic management and display. The majority of the existing cultural relic classification methods require labelling of the samples of the dataset; however, in practical applications, there is often a lack of category labels of samples or an uneven distribution of samples of different categories. To solve this problem, we propose a 3D cultural relic classification method based on a low dimensional descriptor and unsupervised learning. First, the scale-invariant heat kernel signature (Si-HKS) was computed. The heat kernel signature denotes the heat flow of any two vertices across a 3D shape and the heat diffusion propagation is governed by the heat equation. Secondly, the Bag-of-Words (BoW) mechanism was utilized to transform the Si-HKS descriptor into a low-dimensional feature tensor, named a SiHKS-BoW descriptor that is related to entropy. Finally, we applied an unsupervised learning algorithm, called MKDSIF-FCM, to conduct the classification task. A dataset consisting of 3D models from 41 Tang tri-color Hu terracotta Eures was utilized to validate the effectiveness of the proposed method. A series of experiments demonstrated that the SiHKS-BoW descriptor along with the MKDSIF-FCM algorithm showed the best classification accuracy, up to 99.41%, which is a solution for an actual case with the absence of category labels and an uneven distribution of different categories of data. The present work promotes the application of virtual reality in digital projects and enriches the content of digital archaeology.

8.
Sci Rep ; 10(1): 3936, 2020 Feb 27.
Artigo em Inglês | MEDLINE | ID: mdl-32107450

RESUMO

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

9.
Biomed Pharmacother ; 108: 1546-1552, 2018 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-30372856

RESUMO

The incidence of acute liver and kidney injury in pregnancy is companied by Preeclampsia (PE), which has remained a major cause of maternal and fetal morbidity, and mortality. Therefore, a significant treatment to protect against liver and kidney injury of PE requires new drugs to develop potential therapeutic benefits to the clinic. Baicalin played protection role on inhibition of cell apoptosis which is a potential drug for keep liver and kidney from acute injury on PE patients. In this study, we made PE rat disease model with liver and kidney acute injury, and then used low-, medium-, and high-dose of Baicalin to treat PE rat, respectively. We found that Baicalin attenuated acute injury symptoms and inhibited apoptosis of rat liver and kidney tissues. The intervention of Baicalin increased the expression of anti-apoptotic protein XIAP and Bcl-2, reduced the expression of apoptotic protein Caspase-9 in rat liver; and similarly, Baicalin increased the expression of Bcl-2, while inhibited Caspase-9 and AT1 in rat kidney. Interestingly, Baicalin intervention with medium dose showed a better function for inhibiting apoptosis. Our data suggests that Baicalin is a potentially therapeutic candidate for preventing liver and kidney damage, which shed a light on therapeutic benefit for PE rat models.


Assuntos
Injúria Renal Aguda/prevenção & controle , Anti-Inflamatórios não Esteroides/uso terapêutico , Apoptose/efeitos dos fármacos , Flavonoides/uso terapêutico , Hepatopatias/prevenção & controle , Pré-Eclâmpsia/tratamento farmacológico , Injúria Renal Aguda/metabolismo , Injúria Renal Aguda/patologia , Animais , Anti-Inflamatórios não Esteroides/farmacologia , Apoptose/fisiologia , Células Cultivadas , Modelos Animais de Doenças , Feminino , Flavonoides/farmacologia , Pré-Eclâmpsia/metabolismo , Pré-Eclâmpsia/patologia , Gravidez , Ratos , Ratos Sprague-Dawley
10.
Comput Math Methods Med ; 2018: 4567267, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-30046351

RESUMO

In law enforcement investigation cases, sex determination from skull morphology is one of the important steps in establishing the identity of an individual from unidentified human skeleton. To our knowledge, existing studies of sex determination of the skull mostly utilize supervised learning methods to analyze and classify data and can have limitations when applied to actual cases with the absence of category labels in the skull samples or a large difference in the number of male and female samples of the skull. This paper proposes a novel approach which is based on an unsupervised classification technique in performing sex determination of the skull of Han Chinese ethnic group. The 78 landmarks on the outer surface of 3D skull models from computed tomography scans are marked, and a skull dataset of a total of 40 interlandmark measurements is constructed. A stable and efficient unsupervised algorithm which we abbreviated as MKDSIF-FCM is proposed to address the classification problem for the skull dataset. The experimental results of the adult skull suggest that the proposed MKDSIF-FCM algorithm warrants fairly high sex determination accuracy for females and males, which is 98.0% and 93.02%, respectively, and is superior to all the classification methods we attempted. As a result of its fairly high accuracy, extremely good stability, and the advantage of unsupervised learning, the proposed method is potentially applicable for forensic investigations and archaeological studies.


Assuntos
Antropologia Forense , Crânio/anatomia & histologia , Aprendizado de Máquina não Supervisionado , Adolescente , Adulto , Idoso , China , Feminino , Humanos , Imageamento Tridimensional , Masculino , Pessoa de Meia-Idade , Determinação do Sexo pelo Esqueleto , Crânio/diagnóstico por imagem , Adulto Jovem
11.
Dev Biol ; 441(1): 132-145, 2018 09 01.
Artigo em Inglês | MEDLINE | ID: mdl-29966604

RESUMO

Hematopoietic progenitor choice between multipotency and differentiation is tightly regulated by intrinsic factors and extrinsic signals from the surrounding microenvironment. The Drosophila melanogaster hematopoietic lymph gland has emerged as a powerful tool to investigate mechanisms that regulate hematopoietic progenitor choice in vivo. The lymph gland contains progenitor cells, which share key characteristics with mammalian hematopoietic progenitors such as quiescence, multipotency and niche-dependence. The lymph gland is zonally arranged, with progenitors located in medullary zone, differentiating cells in the cortical zone, and the stem cell niche or Posterior Signaling Center (PSC) residing at the base of the medullary zone (MZ). This arrangement facilitates investigations into how signaling from the microenvironment controls progenitor choice. The Drosophila Friend of GATA transcriptional regulator, U-shaped, is a conserved hematopoietic regulator. To identify additional novel intrinsic and extrinsic regulators that interface with U-shaped to control hematopoiesis, we conducted an in vivo screen for factors that genetically interact with u-shaped. Smoothened, a downstream effector of Hedgehog signaling, was one of the factors identified in the screen. Here we report our studies that characterized the relationship between Smoothened and U-shaped. We showed that the PSC and Hedgehog signaling are required for U-shaped expression and that U-shaped is an important intrinsic progenitor regulator. These observations identify a potential link between the progenitor regulatory machinery and extrinsic signals from the PSC. Furthermore, we showed that both Hedgehog signaling and the PSC are required to maintain a subpopulation of progenitors. This led to a delineation of PSC-dependent versus PSC-independent progenitors and provided further evidence that the MZ progenitor population is heterogeneous. Overall, we have identified a connection between a conserved hematopoietic master regulator and a putative stem cell niche, which adds to our understanding of how signals from the microenvironment regulate progenitor multipotency.


Assuntos
Proteínas de Drosophila/metabolismo , Regulação da Expressão Gênica/fisiologia , Proteínas Hedgehog/metabolismo , Hematopoese/fisiologia , Células-Tronco Hematopoéticas/metabolismo , Hemócitos/metabolismo , Transdução de Sinais/fisiologia , Animais , Proteínas de Drosophila/genética , Drosophila melanogaster , Proteínas Hedgehog/genética , Células-Tronco Hematopoéticas/citologia , Hemócitos/citologia
12.
Sci Rep ; 7(1): 14853, 2017 11 01.
Artigo em Inglês | MEDLINE | ID: mdl-29093502

RESUMO

The relationship between evolutionary rates and gene expression in model plant orthologs is well documented. However, little is known about the relationships between gene expression and evolutionary trends in Arachis orthologs. We identified 7,435 one-to-one orthologs, including 925 single-copy and 6,510 multiple-copy sequences in Arachis duranensis and Arachis ipaënsis. Codon usage was stronger for shorter polypeptides, which were encoded by codons with higher GC contents. Highly expressed coding sequences had higher codon usage bias, GC content, and expression breadth. Additionally, expression breadth was positively correlated with polypeptide length, but there was no correlation between gene expression and polypeptide length. Inferred selective pressure was also negatively correlated with both gene expression and expression breadth in all one-to-one orthologs, while positively but non-significantly correlated with gene expression in sequences with signatures of positive selection. Gene expression levels and expression breadth were significantly higher for single-copy genes than for multiple-copy genes. Similarly, the gene expression and expression breadth in sequences with signatures of purifying selection were higher than those of sequences with positive selective signatures. These results indicated that gene expression differed between single-copy and multiple-copy genes as well as sequences with signatures of positive and purifying selection.


Assuntos
Arachis/genética , Evolução Biológica , Códon/genética , Expressão Gênica , Dosagem de Genes , Proteínas de Plantas/genética , Especificidade da Espécie
13.
PLoS One ; 11(5): e0155372, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27163255

RESUMO

Recent studies suggest that mammalian hematopoietic stem and progenitor cells (HSPCs) respond directly to infection and inflammatory signaling. These signaling pathways also regulate HSPCs during steady-state conditions (absence of infection), and dysregulation may lead to cancer or age-related loss of progenitor repopulation capacity. Toll-like receptors (TLRs) are a major class of pathogen recognition receptors, and are expressed on the surface of immune effector cells and HSPCs. TLR/NF-κB activation promotes HSPCs differentiation; however, the mechanisms by which this signaling pathway alters the intrinsic transcriptional landscape are not well understood. Although Drosophila prohemocytes are the functional equivalent of mammalian HSPCs, a prohemocyte-specific function for Toll signaling has not been reported. Using Drosophila transgenics, we identified prohemocyte-specific roles for Toll pathway members, Dorsal and Cactus. We showed that Dorsal is required to limit the size of the progenitor pool. Additionally, we showed that activation of Toll signaling in prohemocytes drives differentiation in a manner that is analogous to TLR/NF-κB-driven HSPC differentiation. This was accomplished by showing that over-expression of Dorsal, or knockdown of Cactus, promotes differentiation. We also investigated whether Dorsal and Cactus control prohemocyte differentiation by regulating a key intrinsic prohemocyte factor, U-shaped (Ush), which is known to promote multipotency and block differentiation. We showed that Dorsal repressed Ush expression levels to promote differentiation, whereas Cactus maintained Ush levels to block differentiation. Additionally, we showed that another Toll antagonist, Lesswright, also maintained the level of Ush to block differentiation and promote proliferative quiescence. Collectively, these results identify a novel role for Ush as a downstream target of Toll signaling.


Assuntos
Proteínas de Ligação a DNA/genética , Proteínas de Drosophila/genética , Drosophila melanogaster/genética , Hemócitos/imunologia , Proteínas Nucleares/genética , Fosfoproteínas/genética , Receptores Toll-Like/genética , Fatores de Transcrição/genética , Enzimas de Conjugação de Ubiquitina/genética , Animais , Animais Geneticamente Modificados , Diferenciação Celular , Proliferação de Células , Proteínas de Ligação a DNA/imunologia , Proteínas de Drosophila/imunologia , Drosophila melanogaster/crescimento & desenvolvimento , Drosophila melanogaster/imunologia , Feminino , Regulação da Expressão Gênica no Desenvolvimento , Hematopoese/genética , Hematopoese/imunologia , Hemócitos/citologia , Imunidade Inata , Masculino , Proteínas Nucleares/imunologia , Fosfoproteínas/imunologia , Transdução de Sinais , Receptores Toll-Like/imunologia , Fatores de Transcrição/imunologia , Enzimas de Conjugação de Ubiquitina/imunologia
14.
PLoS One ; 9(9): e107768, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-25226030

RESUMO

Mitochondrial reactive oxygen species (ROS) regulate a variety of biological processes by networking with signal transduction pathways to maintain homeostasis and support adaptation to stress. In this capacity, ROS have been shown to promote the differentiation of progenitor cells, including mammalian embryonic and hematopoietic stem cells and Drosophila hematopoietic progenitors (prohemocytes). However, many questions remain about how ROS alter the regulatory machinery to promote progenitor differentiation. Here, we provide evidence for the hypothesis that ROS reduce E-cadherin levels to promote Drosophila prohemocyte differentiation. Specifically, we show that knockdown of the antioxidants, Superoxide dismutatase 2 and Catalase reduce E-cadherin protein levels prior to the loss of Odd-skipped-expressing prohemocytes. Additionally, over-expression of E-cadherin limits prohemocyte differentiation resulting from paraquat-induced oxidative stress. Furthermore, two established targets of ROS, Enhancer of Polycomb and FOS, control the level of E-cadherin protein expression. Finally, we show that knockdown of either Superoxide dismutatase 2 or Catalase leads to an increase in the E-cadherin repressor, Serpent. As a result, antioxidants and targets of ROS can control E-cadherin protein levels, and over-expression of E-cadherin can ameliorate the prohemocyte response to oxidative stress. Collectively, these data strongly suggest that ROS promote differentiation by reducing E-cadherin levels. In mammalian systems, ROS promote embryonic stem cell differentiation, whereas E-cadherin blocks differentiation. However, it is not known if elevated ROS reduce E-cadherin to promote embryonic stem cell differentiation. Thus, our findings may have identified an important mechanism by which ROS promote stem/progenitor cell differentiation.


Assuntos
Antioxidantes/farmacologia , Caderinas/metabolismo , Diferenciação Celular/efeitos dos fármacos , Drosophila/metabolismo , Hemócitos/efeitos dos fármacos , Hemócitos/metabolismo , Animais , Antioxidantes/metabolismo , Caderinas/genética , Catalase/genética , Catalase/metabolismo , Diferenciação Celular/genética , Drosophila/genética , Proteínas de Drosophila/genética , Proteínas de Drosophila/metabolismo , Sequestradores de Radicais Livres/metabolismo , Fatores de Transcrição GATA/genética , Fatores de Transcrição GATA/metabolismo , Regulação da Expressão Gênica , Técnicas de Silenciamento de Genes , Células-Tronco Hematopoéticas/citologia , Células-Tronco Hematopoéticas/efeitos dos fármacos , Células-Tronco Hematopoéticas/metabolismo , Hemócitos/citologia , Proteínas Quinases JNK Ativadas por Mitógeno/metabolismo , Espécies Reativas de Oxigênio/metabolismo , Superóxido Dismutase/genética , Superóxido Dismutase/metabolismo
15.
PLoS One ; 8(9): e74684, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-24040319

RESUMO

A fundamental question in stem cell biology concerns the regulatory strategies that control the choice between multipotency and differentiation. Drosophila blood progenitors or prohemocytes exhibit key stem cell characteristics, including multipotency, quiescence, and niche dependence. As a result, studies of Drosophila hematopoiesis have provided important insights into the molecular mechanisms that control these processes. Here, we show that E-cadherin is an important regulator of prohemocyte fate choice, maintaining prohemocyte multipotency and blocking differentiation. These functions are reminiscent of the role of E-cadherin in mammalian embryonic stem cells. We also show that mis-expression of E-cadherin in differentiating hemocytes disrupts the boundary between these cells and undifferentiated prohemocytes. Additionally, upregulation of E-cadherin in differentiating hemocytes increases the number of intermediate cell types expressing the prohemocyte marker, Patched. Furthermore, our studies indicate that the Drosophila GATA transcriptional co-factor, U-shaped, is required for E-cadherin expression. Consequently, E-cadherin is a downstream target of U-shaped in the maintenance of prohemocyte multipotency. In contrast, we showed that forced expression of the U-shaped GATA-binding partner, Serpent, repressed E-cadherin expression and promoted lamellocyte differentiation. Thus, U-shaped may maintain E-cadherin expression by blocking the inhibitory activity of Serpent. Collectively, these observations suggest that GATA:FOG complex formation regulates E-cadherin levels and, thereby, the choice between multipotency and differentiation. The work presented in this report further defines the molecular basis of prohemocyte cell fate choice, which will provide important insights into the mechanisms that govern stem cell biology.


Assuntos
Caderinas/metabolismo , Proteínas de Drosophila/metabolismo , Drosophila/fisiologia , Fatores de Transcrição GATA/metabolismo , Células-Tronco Hematopoéticas/citologia , Animais , Diferenciação Celular , Linhagem da Célula , Perfilação da Expressão Gênica , Regulação da Expressão Gênica no Desenvolvimento , Hemócitos/citologia , Estrutura Terciária de Proteína , Transdução de Sinais , Células-Tronco/citologia
16.
Genesis ; 49(3): 105-16, 2011 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-21381183

RESUMO

Studies using Drosophila have contributed significantly to our understanding of regulatory mechanisms that control stem cell fate choice. The Drosophila blood cell progenitor or prohemocyte shares important characteristics with mammalian hematopoietic stem cells, including quiescence, niche dependence, and the capacity to form all three fly blood cell types. This report extends our understanding of prohemocyte fate choice by showing that the zinc-finger protein Odd-skipped promotes multipotency and blocks differentiation. Odd-skipped was expressed in prohemocytes and downregulated in terminally differentiated plasmatocytes. Furthermore, Odd-skipped maintained the prohemocyte population and blocked differentiation of plasmatocytes and lamellocytes but not crystal cells. A previous study showed that Odd-skipped expression is downregulated by Decapentaplegic signaling. This report provides a functional basis for this regulator/target pair by suggesting that Decapentaplegic signaling limits Odd-skipped expression to promote prohemocyte differentiation. Overall, these studies are the basis for a gene regulatory model of prohemocyte cell fate choice.


Assuntos
Células Sanguíneas/citologia , Proteínas de Ligação a DNA/metabolismo , Proteínas de Drosophila/metabolismo , Drosophila/crescimento & desenvolvimento , Células-Tronco Hematopoéticas/citologia , Fatores de Transcrição/metabolismo , Animais , Diferenciação Celular , Proteínas de Ligação a DNA/genética , Regulação para Baixo , Drosophila/genética , Proteínas de Drosophila/genética , Regulação da Expressão Gênica no Desenvolvimento , Redes Reguladoras de Genes , Transdução de Sinais , Fatores de Transcrição/genética , Dedos de Zinco
17.
Mol Cell Biol ; 29(22): 6086-96, 2009 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-19737914

RESUMO

Studies using Drosophila melanogaster have contributed significantly to our understanding of the interaction between stem cells and their protective microenvironments or stem cell niches. During lymph gland hematopoiesis, the Drosophila posterior signaling center functions as a stem cell niche to maintain prohemocyte multipotency through Hedgehog and JAK/STAT signaling. In this study, we provide evidence that the Friend of GATA protein U-shaped is an important regulator of lymph gland prohemocyte potency and differentiation. U-shaped expression was determined to be upregulated in third-instar lymph gland prohemocytes and downregulated in a subpopulation of differentiating blood cells. Genetic analyses indicated that U-shaped maintains the prohemocyte population by blocking differentiation. In addition, activated STAT directly regulated ush expression as evidenced by results from loss- and gain-of-function studies and from analyses of the u-shaped hematopoietic cis-regulatory module. Collectively, these findings identify U-shaped as a downstream effector of the posterior signaling center, establishing a novel link between the stem cell niche and the intrinsic regulation of potency and differentiation. Given the functional conservation of Friend of GATA proteins and the role that GATA factors play during cell fate choice, these factors may regulate essential functions of vertebrate hematopoietic stem cells, including processing signals from the stem cell niche.


Assuntos
Proteínas de Drosophila/genética , Drosophila melanogaster/genética , Hemócitos/citologia , Janus Quinases/metabolismo , Tecido Linfoide/citologia , Fatores de Transcrição STAT/metabolismo , Fatores de Transcrição/genética , Regulação para Cima/genética , Animais , Sítios de Ligação , Biomarcadores/metabolismo , Diferenciação Celular , Regulação para Baixo/genética , Drosophila melanogaster/citologia , Drosophila melanogaster/enzimologia , Ativação Enzimática , Redes Reguladoras de Genes , Genes de Insetos , Hematopoese , Hemócitos/enzimologia , Larva/metabolismo , Tecido Linfoide/enzimologia , Mutação/genética , Transdução de Sinais
18.
Mol Biol Cell ; 20(6): 1661-70, 2009 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-19158395

RESUMO

Cajal bodies (CBs) are nuclear organelles that occur in a variety of organisms, including vertebrates, insects, and plants. They are most often identified with antibodies against the marker protein coilin. Because the amino acid sequence of coilin is not strongly conserved evolutionarily, coilin orthologues have been difficult to recognize by homology search. Here, we report the identification of Drosophila melanogaster coilin and describe its distribution in tissues of the fly. Surprisingly, we found coilin not only in CBs but also in histone locus bodies (HLBs), calling into question the use of coilin as an exclusive marker for CBs. We analyzed two null mutants in the coilin gene and a piggyBac insertion mutant, which leads to specific loss of coilin from the germline. All three mutants are homozygous viable and fertile. Cells that lack coilin also lack distinct foci of other CB markers, including fibrillarin, the survival motor neuron (SMN) protein, U2 small nuclear RNA (snRNA), U5 snRNA, and the small CB-specific (sca) RNA U85. However, HLBs are not obviously affected in coilin-null flies. Thus, coilin is required for normal CB organization in Drosophila but is not essential for viability or production of functional gametes.


Assuntos
Corpos Enovelados/metabolismo , Drosophila melanogaster/metabolismo , Proteínas Nucleares/metabolismo , Envelhecimento/fisiologia , Sequência de Aminoácidos , Animais , Ciclo Celular , Sequência Conservada , Drosophila melanogaster/citologia , Drosophila melanogaster/genética , Feminino , Histonas/metabolismo , Humanos , Masculino , Dados de Sequência Molecular , Mutação/genética , Proteínas Nucleares/química , Proteínas Nucleares/genética , Ovário/metabolismo , Alinhamento de Sequência , Testículo/metabolismo
19.
Sci China C Life Sci ; 49(1): 37-45, 2006 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-16544574

RESUMO

The corpus luteum (CL) is a transient endocrine organ that secretes progesterone to support early pregnancy. If implantation is unsuccessful, luteolysis is initiated. Extensive tissue remodeling occurs during CL formation and luteolysis. In this study, we have studied the possible involvement of MMP-2, -9, -14, and their inhibitors, TIMP-1, -2, -3 in the CL of cycling rhesus monkey at various stages by in situ hybridization, immunohistochemistry and microscopic assessment. The results showed that the MMP-2 mRNA and protein were mainly expressed in the endothelial cells at the early and middle stages of the CL development, while their expressions were observed in the luteal cells at the late stage during luteal regression. MMP-9 protein was detected in the CL at the early and middle stages, and obviously increased at the late stage. The expressions of MMP-14 and TIMP-1 mRNA were high at the early and late stages, and low at the middle stage. TIMP-2 mRNA was high throughout all the stages, the highest level could be observed at the late stage. The TIMP-3 production was detected throughout all the stages, but obviously declined during CL regression. MMP-9, -14 and TIMP-1, -2, -3 were mainly localized in the cytoplasm of the steroidogenic cells. The results suggest that the MMP/TIMP system is involved in regulation of CL development in the primate, and the coordinated expression of MMP-2, -14 and TIMP-1, -3 may have a potential role in the CL formation and the functional maintaining, while the interaction of MMP-2, -9, -14 and TIMP-1, -2, -3 might also play a role in CL regression at the late stage of CL development in the primate.


Assuntos
Corpo Lúteo/efeitos dos fármacos , Corpo Lúteo/metabolismo , Macaca mulatta/fisiologia , Metaloproteinase 2 da Matriz/genética , Metaloproteinase 9 da Matriz/genética , Metaloproteinases da Matriz/genética , Inibidores Teciduais de Metaloproteinases/genética , Animais , Corpo Lúteo/enzimologia , Feminino , Imuno-Histoquímica , Hibridização In Situ , Inibidores de Metaloproteinases de Matriz , Metaloproteinases da Matriz Associadas à Membrana , RNA Mensageiro/genética
20.
Front Biosci ; 10: 2496-503, 2005 Sep 01.
Artigo em Inglês | MEDLINE | ID: mdl-15970512

RESUMO

The corpus luteum (CL) is a transient endocrine organ that secretes progesterone to support early pregnancy. Using in situ hybridization, immunohistochemistry and computer imaging analysis, we have investigated the expression of transforming growth factor beta 1(TGF-beta 1) , its receptors, type I (TbetaR-I) and type II (TbetaR-II) as well as steroidogenic acute regulatory protein (StAR) in the corpus luteum (CL) of the rhesus monkey at various stages of CL development. The CL was induced by injection of pregnant mare serum gonadotropin (PMSG)/human chorionic gonadotropin (hCG). The expression of TGF-beta 1, TbetaR-I and TbetaR-II as well as StAR was detected in the CL in a time-dependent manner, reaching the maximum levels on D10 (functional stage), and decreased on Day 18 (regression stage). Injection of interferon-gamma (IFN-gamma) or tumor necrosis factor-alpha (TNF-alpha) at the functional stage of CL development significantly decreased the expression of StAR, as well as TGF-beta 1, and its receptors TbetaR-I and TbetaR-II. Our results suggest that TGF-beta 1 and its receptors may play an important regulatory role in maintaining CL function, and that IFN-gamma or TNF-alpha is capable of inhibiting their expression in the CL.


Assuntos
Corpo Lúteo/efeitos dos fármacos , Interferon gama/farmacologia , Receptores de Fatores de Crescimento Transformadores beta/metabolismo , Fator de Crescimento Transformador beta/metabolismo , Fator de Necrose Tumoral alfa/farmacologia , Animais , Corpo Lúteo/metabolismo , Feminino , Expressão Gênica/efeitos dos fármacos , Gonadotropinas Equinas/farmacologia , Macaca mulatta , Gravidez , Sistemas do Segundo Mensageiro/fisiologia , Fator de Crescimento Transformador beta/genética , Fator de Crescimento Transformador beta1
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